STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHI60971.1Hypothetical protein. (404 aa)    
Predicted Functional Partners:
SHI60955.1
Leucine rich repeat-containing protein.
   
  0.807
SHI89041.1
Listeria/Bacterioides repeat-containing protein.
 
 
 0.776
SHI51422.1
S-layer homology domain-containing protein.
  
  
  0.763
SHI37586.1
S-layer homology domain-containing protein.
 
 
  0.735
SHI79584.1
S-layer homology domain-containing protein.
  
  
  0.735
SHI89138.1
S-layer homology domain-containing protein.
 
 
 0.725
SHI54234.1
Hypothetical protein.
    
 
 0.715
SHI54383.1
Hypothetical protein.
    
 
 0.715
SHI67568.1
Hypothetical protein.
 
 
 0.634
SHI53825.1
Hypothetical protein.
  
     0.630
Your Current Organism:
Lutispora thermophila
NCBI taxonomy Id: 1122184
Other names: Clostridium sp. EBR-02E-0046, L. thermophila DSM 19022, Lutispora thermophila DSM 19022, Lutispora thermophila EBR46
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.