STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHI74112.1Accessory gene regulator B. (188 aa)    
Predicted Functional Partners:
SHI74155.1
GHKL domain-containing protein.
 
 
 0.952
SHI75327.1
GHKL domain-containing protein.
 
 
 0.911
SHI74728.1
GHKL domain-containing protein.
 
 
 0.807
SHJ35751.1
Sensor_kinase_SpoOB-type, alpha-helical domain.
 
  
  0.806
SHJ16809.1
Signal transduction histidine kinase.
  
 
 0.800
SHI74177.1
Two component transcriptional regulator, LytTR family.
 
  
 0.798
SHI74133.1
Cyclic lactone autoinducer peptide.
       0.773
SHI74891.1
Sensor histidine kinase YesM.
 
 
 0.758
SHI69235.1
Sensor_kinase_SpoOB-type, alpha-helical domain.
    
  0.718
SHI75348.1
Two component transcriptional regulator, LytTR family.
 
  
 0.624
Your Current Organism:
Lutispora thermophila
NCBI taxonomy Id: 1122184
Other names: Clostridium sp. EBR-02E-0046, L. thermophila DSM 19022, Lutispora thermophila DSM 19022, Lutispora thermophila EBR46
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.