STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHI92022.1Penicillin-binding protein 2. (558 aa)    
Predicted Functional Partners:
SHJ10615.1
Cell division protein FtsW, lipid II flippase; Belongs to the SEDS family.
 
 0.978
rodA
Rod shape determining protein RodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.
 
 0.976
SHI62349.1
Cell division protein FtsW; Belongs to the SEDS family.
 
 0.963
SHJ12378.1
Penicillin-binding protein 1A.
 
 
0.895
SHI62415.1
Cell division protein FtsQ; Essential cell division protein.
  
 
 0.830
SHJ00627.1
Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape.
 
 
 0.823
SHJ00676.1
Penicillin-binding protein 2.
  
  
0.802
SHI62206.1
Hypothetical protein.
  
 
 0.799
SHI42490.1
Penicillin binding protein transpeptidase domain-containing protein.
 
  
0.798
murD
UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.
  
 0.778
Your Current Organism:
Lutispora thermophila
NCBI taxonomy Id: 1122184
Other names: Clostridium sp. EBR-02E-0046, L. thermophila DSM 19022, Lutispora thermophila DSM 19022, Lutispora thermophila EBR46
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.