Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SHI73816.1 | SHJ08457.1 | SAMN02745176_01160 | SAMN02745176_02352 | Molecular chaperone HtpG. | Ribosomal 50S subunit-recycling heat shock protein, contains S4 domain. | 0.510 |
| SHI73816.1 | groS | SAMN02745176_01160 | SAMN02745176_00124 | Molecular chaperone HtpG. | Chaperonin GroES; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter. | 0.863 |
| SHI73816.1 | groS-2 | SAMN02745176_01160 | SAMN02745176_03281 | Molecular chaperone HtpG. | Chaperonin GroES; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter. | 0.863 |
| SHI73816.1 | grpE | SAMN02745176_01160 | SAMN02745176_01117 | Molecular chaperone HtpG. | Molecular chaperone GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP [...] | 0.933 |
| SHI73816.1 | hslU | SAMN02745176_01160 | SAMN02745176_02252 | Molecular chaperone HtpG. | ATP-dependent HslUV protease ATP-binding subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis. | 0.862 |
| SHI73816.1 | hslV | SAMN02745176_01160 | SAMN02745176_02251 | Molecular chaperone HtpG. | ATP-dependent HslUV protease, peptidase subunit HslV; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery. | 0.868 |
| SHI73816.1 | lon | SAMN02745176_01160 | SAMN02745176_00208 | Molecular chaperone HtpG. | ATP-dependent proteinase. Serine peptidase. MEROPS family S16; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner. | 0.832 |
| SHJ05571.1 | codY | SAMN02745176_02258 | SAMN02745176_02253 | Flagellar motor switch protein FliG. | Transcriptional pleiotropic repressor; DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor; Belongs to the CodY family. | 0.538 |
| SHJ05571.1 | hslU | SAMN02745176_02258 | SAMN02745176_02252 | Flagellar motor switch protein FliG. | ATP-dependent HslUV protease ATP-binding subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis. | 0.472 |
| SHJ05571.1 | hslV | SAMN02745176_02258 | SAMN02745176_02251 | Flagellar motor switch protein FliG. | ATP-dependent HslUV protease, peptidase subunit HslV; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery. | 0.856 |
| SHJ08457.1 | SHI73816.1 | SAMN02745176_02352 | SAMN02745176_01160 | Ribosomal 50S subunit-recycling heat shock protein, contains S4 domain. | Molecular chaperone HtpG. | 0.510 |
| SHJ08457.1 | SHJ26205.1 | SAMN02745176_02352 | SAMN02745176_02954 | Ribosomal 50S subunit-recycling heat shock protein, contains S4 domain. | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. | 0.510 |
| SHJ08457.1 | grpE | SAMN02745176_02352 | SAMN02745176_01117 | Ribosomal 50S subunit-recycling heat shock protein, contains S4 domain. | Molecular chaperone GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP [...] | 0.634 |
| SHJ08457.1 | hslU | SAMN02745176_02352 | SAMN02745176_02252 | Ribosomal 50S subunit-recycling heat shock protein, contains S4 domain. | ATP-dependent HslUV protease ATP-binding subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis. | 0.652 |
| SHJ08457.1 | hslV | SAMN02745176_02352 | SAMN02745176_02251 | Ribosomal 50S subunit-recycling heat shock protein, contains S4 domain. | ATP-dependent HslUV protease, peptidase subunit HslV; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery. | 0.837 |
| SHJ08457.1 | lon | SAMN02745176_02352 | SAMN02745176_00208 | Ribosomal 50S subunit-recycling heat shock protein, contains S4 domain. | ATP-dependent proteinase. Serine peptidase. MEROPS family S16; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner. | 0.496 |
| SHJ26205.1 | SHJ08457.1 | SAMN02745176_02954 | SAMN02745176_02352 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. | Ribosomal 50S subunit-recycling heat shock protein, contains S4 domain. | 0.510 |
| SHJ26205.1 | groS | SAMN02745176_02954 | SAMN02745176_00124 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. | Chaperonin GroES; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter. | 0.784 |
| SHJ26205.1 | groS-2 | SAMN02745176_02954 | SAMN02745176_03281 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. | Chaperonin GroES; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter. | 0.784 |
| SHJ26205.1 | grpE | SAMN02745176_02954 | SAMN02745176_01117 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. | Molecular chaperone GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP [...] | 0.858 |
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