STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ28418.1ArsR family transcriptional regulator. (144 aa)    
Predicted Functional Partners:
SHJ28379.1
ABC-2 type transport system permease protein.
 
     0.860
SHJ28398.1
ABC-2 type transport system ATP-binding protein.
 
     0.858
SHI81833.1
Uncharacterized membrane protein.
  
  
 0.526
birA
Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
     
 0.512
SHJ31054.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
 
  
 0.502
SHJ20724.1
Transcriptional regulator, ArsR family.
  
   
 0.485
SHI95943.1
Cu+-exporting ATPase.
  
  
 0.469
SHI76279.1
NAD-dependent deacetylase.
  
 
  0.456
SHI83600.1
NAD-dependent deacetylase.
  
 
  0.456
nadK
NAD+ kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.
   
 
  0.451
Your Current Organism:
Lutispora thermophila
NCBI taxonomy Id: 1122184
Other names: Clostridium sp. EBR-02E-0046, L. thermophila DSM 19022, Lutispora thermophila DSM 19022, Lutispora thermophila EBR46
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.