Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SHI50324.1 | SHJ39876.1 | SAMN02745176_00458 | SAMN02745176_03455 | Glycine/D-amino acid oxidase. | tRNA (cytidine(34)-2'-O)-methyltransferase. | 0.454 |
| SHI50324.1 | tig | SAMN02745176_00458 | SAMN02745176_00204 | Glycine/D-amino acid oxidase. | Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily. | 0.468 |
| SHJ39876.1 | SHI50324.1 | SAMN02745176_03455 | SAMN02745176_00458 | tRNA (cytidine(34)-2'-O)-methyltransferase. | Glycine/D-amino acid oxidase. | 0.454 |
| SHJ39876.1 | frr | SAMN02745176_03455 | SAMN02745176_03073 | tRNA (cytidine(34)-2'-O)-methyltransferase. | Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family. | 0.465 |
| SHJ39876.1 | mraY | SAMN02745176_03455 | SAMN02745176_00857 | tRNA (cytidine(34)-2'-O)-methyltransferase. | Phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily. | 0.487 |
| SHJ39876.1 | tig | SAMN02745176_03455 | SAMN02745176_00204 | tRNA (cytidine(34)-2'-O)-methyltransferase. | Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily. | 0.439 |
| frr | SHJ39876.1 | SAMN02745176_03073 | SAMN02745176_03455 | Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family. | tRNA (cytidine(34)-2'-O)-methyltransferase. | 0.465 |
| frr | mraY | SAMN02745176_03073 | SAMN02745176_00857 | Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family. | Phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily. | 0.576 |
| frr | tig | SAMN02745176_03073 | SAMN02745176_00204 | Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family. | Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily. | 0.934 |
| mraY | SHJ39876.1 | SAMN02745176_00857 | SAMN02745176_03455 | Phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily. | tRNA (cytidine(34)-2'-O)-methyltransferase. | 0.487 |
| mraY | frr | SAMN02745176_00857 | SAMN02745176_03073 | Phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily. | Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family. | 0.576 |
| tig | SHI50324.1 | SAMN02745176_00204 | SAMN02745176_00458 | Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily. | Glycine/D-amino acid oxidase. | 0.468 |
| tig | SHJ39876.1 | SAMN02745176_00204 | SAMN02745176_03455 | Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily. | tRNA (cytidine(34)-2'-O)-methyltransferase. | 0.439 |
| tig | frr | SAMN02745176_00204 | SAMN02745176_03073 | Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily. | Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family. | 0.934 |