STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ86686.1Hypothetical protein. (242 aa)    
Predicted Functional Partners:
SJZ86643.1
Protein of unknown function.
       0.811
SJZ86700.1
Putative toxin-antitoxin system toxin component, PIN family.
       0.620
SJZ86623.1
Peptidase family M23.
       0.582
SJZ86601.1
Elongation factor G.
       0.417
Your Current Organism:
Lysobacter spongiicola
NCBI taxonomy Id: 1122188
Other names: L. spongiicola DSM 21749, Lysobacter spongiicola DSM 21749
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.