STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHI46193.1Hypothetical protein. (371 aa)    
Predicted Functional Partners:
SHI46253.1
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB.
 
   
 0.770
SHJ80723.1
Flagellar basal-body rod protein FlgG.
   
   0.681
SHI46222.1
Carboxyl-terminal processing protease; Belongs to the peptidase S41A family.
       0.633
SHI46288.1
Cell division protein FtsX; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
       0.631
ftsE
Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.
       0.591
SHI46347.1
Type II secretion system protein G (GspG).
       0.524
SHI46376.1
General secretion pathway protein G.
       0.523
SHJ73212.1
Flagellar basal-body rod protein FlgC.
   
   0.516
SHJ80696.1
Flagellar basal-body rod protein FlgG; Belongs to the flagella basal body rod proteins family.
   
   0.516
SHI46410.1
General secretion pathway protein D; Belongs to the bacterial secretin family.
       0.506
Your Current Organism:
Malonomonas rubra
NCBI taxonomy Id: 1122189
Other names: M. rubra DSM 5091, Malonomonas rubra DSM 5091
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.