STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHI48541.1PTSINtr with GAF domain, PtsP; Belongs to the PEP-utilizing enzyme family. (776 aa)    
Predicted Functional Partners:
SHJ36387.1
Phosphocarrier protein FPr.
 
0.988
SHJ36312.1
PTS system D-fructose-specific IIB component (F1P-forming), Frc family (TC 4.A.2.1.1)/PTS system D-fructose-specific IIC component (F1P-forming), Frc family (TC 4.A.2.1.1).
 
 
 0.987
SHI77844.1
Phosphocarrier protein.
 
 0.982
SHI99479.1
PAS domain S-box-containing protein.
   
 0.939
SHJ38083.1
CheY chemotaxis protein or a CheY-like REC (receiver) domain.
   
 0.939
SHJ52834.1
PAS domain S-box-containing protein.
   
 0.939
SHI95347.1
His Kinase A (phospho-acceptor) domain-containing protein.
   
 0.934
SHI95271.1
PAS domain S-box-containing protein.
   
 0.933
SHJ83991.1
PAS domain S-box-containing protein.
   
 0.927
SHJ73697.1
Hypothetical protein.
   
 0.917
Your Current Organism:
Malonomonas rubra
NCBI taxonomy Id: 1122189
Other names: M. rubra DSM 5091, Malonomonas rubra DSM 5091
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.