STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHI59893.14Fe-4S dicluster domain-containing protein. (66 aa)    
Predicted Functional Partners:
SHJ68085.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 0.997
SHJ07182.1
Glutamate synthase (NADPH) GltB3 subunit.
  
 0.987
SHJ20743.1
Glyoxylase, beta-lactamase superfamily II.
  
 0.969
SHJ23466.1
Formate dehydrogenase beta subunit.
  
 0.969
SHI98418.1
2-oxoisovalerate ferredoxin oxidoreductase beta subunit.
  
 
 0.961
SHJ28634.1
Glutamate synthase (NADPH) large subunit.
    
 0.955
SHJ07209.1
Glutamate synthase (NADPH/NADH) large chain; Belongs to the glutamate synthase family.
    
 0.954
mdh
Malate dehydrogenase (NAD); Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.
  
 0.949
SHI55108.1
Isocitrate dehydrogenase; Belongs to the monomeric-type IDH family.
  
 0.942
SHJ06564.1
MauM/NapG family ferredoxin-type protein.
  
 0.941
Your Current Organism:
Malonomonas rubra
NCBI taxonomy Id: 1122189
Other names: M. rubra DSM 5091, Malonomonas rubra DSM 5091
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.