STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHI77491.1ABC-type transport system, involved in lipoprotein release, permease component. (405 aa)    
Predicted Functional Partners:
SHI77522.1
Outer membrane lipoprotein-sorting protein.
 
 
 
 0.974
SHI77436.1
Putative ABC transport system ATP-binding protein.
 
 0.972
SHJ66177.1
Putative ABC transport system ATP-binding protein.
 
 0.932
SHI77404.1
Hypothetical protein.
 
    0.916
SHI52611.1
Putative ABC transport system ATP-binding protein.
 
 0.892
lolD
Lipoprotein-releasing system ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
 
 0.861
SHJ18076.1
Putative ABC transport system ATP-binding protein.
 
 0.856
SHJ09520.1
Putative ABC transport system ATP-binding protein.
 
 0.852
SHJ66241.1
Outer membrane lipoprotein-sorting protein.
 
 
 
 0.844
SHI77462.1
ABC-type transport system, involved in lipoprotein release, permease component.
 
    
0.828
Your Current Organism:
Malonomonas rubra
NCBI taxonomy Id: 1122189
Other names: M. rubra DSM 5091, Malonomonas rubra DSM 5091
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.