STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHI95720.1TRAP-type mannitol/chloroaromatic compound transport system, substrate-binding protein; Part of the tripartite ATP-independent periplasmic (TRAP) transport system. (385 aa)    
Predicted Functional Partners:
SHI95751.1
TRAP-type mannitol/chloroaromatic compound transport system, small permease component.
 
  
 0.876
SHI95781.1
TRAP transporter, DctM subunit.
 
  
 0.860
SHJ10511.1
TRAP-type mannitol/chloroaromatic compound transport system, small permease component.
 
  
 0.802
SHJ10545.1
TRAP transporter, DctM subunit.
 
  
 0.802
SHJ36216.1
C4-dicarboxylate transporter, DctM subunit.
  
     0.663
SHJ52117.1
C4-dicarboxylate transporter, DctM subunit.
  
     0.641
SHJ36125.1
TRAP-type C4-dicarboxylate transport system, substrate-binding protein.
  
  
 0.556
SHJ36166.1
TRAP-type C4-dicarboxylate transport system, substrate-binding protein.
  
  
 0.554
SHJ10472.1
TRAP-type mannitol/chloroaromatic compound transport system, substrate-binding protein; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.
  
  
 
0.484
Your Current Organism:
Malonomonas rubra
NCBI taxonomy Id: 1122189
Other names: M. rubra DSM 5091, Malonomonas rubra DSM 5091
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.