STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ11352.1FHA domain-containing protein. (123 aa)    
Predicted Functional Partners:
SHJ11433.1
Serine/threonine protein kinase.
 
 
 0.993
SHJ83991.1
PAS domain S-box-containing protein.
  
 
 0.955
SHI99479.1
PAS domain S-box-containing protein.
  
 
 0.940
SHJ11387.1
Protein phosphatase.
 
 
 0.919
SHI93497.1
2-oxoglutarate dehydrogenase E1 component.
    
 
 0.910
SHJ83962.1
PAS domain S-box-containing protein.
  
 
 0.907
SHJ73697.1
Hypothetical protein.
  
 
 0.888
SHJ37089.1
PAS domain S-box-containing protein.
  
 
 0.865
SHI95271.1
PAS domain S-box-containing protein.
  
 
 0.863
SHJ08390.1
GAF sensor signal transduction histidine kinase.
  
 
 0.863
Your Current Organism:
Malonomonas rubra
NCBI taxonomy Id: 1122189
Other names: M. rubra DSM 5091, Malonomonas rubra DSM 5091
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.