STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ17999.1CBS domain-containing protein. (481 aa)    
Predicted Functional Partners:
SHI92105.1
Cation/acetate symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
  
 0.887
SHJ88121.1
Cation/acetate symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
  
 0.871
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
    
 0.867
SHJ28634.1
Glutamate synthase (NADPH) large subunit.
    
 0.867
SHJ68085.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
  0.848
SHI99521.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
  
  
  0.821
SHI91055.1
Cation/acetate symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
  
 0.806
SHJ07182.1
Glutamate synthase (NADPH) GltB3 subunit.
    
  0.804
SHI92064.1
Putative solute:sodium symporter small subunit.
 
     0.765
SHI98418.1
2-oxoisovalerate ferredoxin oxidoreductase beta subunit.
    
  0.751
Your Current Organism:
Malonomonas rubra
NCBI taxonomy Id: 1122189
Other names: M. rubra DSM 5091, Malonomonas rubra DSM 5091
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.