STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ29262.1Hypothetical protein. (391 aa)    
Predicted Functional Partners:
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
    
  0.783
SHJ73464.1
Competence/damage-inducible protein cinA; Belongs to the CinA family.
    
  0.775
SHJ20176.1
Lysophospholipase L1.
  
 0.740
SHJ39658.1
acyl-CoA thioesterase-1.
  
 0.740
SHJ57014.1
Lysophospholipase L1.
  
 0.740
SHJ29289.1
Hypothetical protein.
       0.678
SHJ80723.1
Flagellar basal-body rod protein FlgG.
    
   0.550
SHI45400.1
Outer membrane autotransporter barrel domain-containing protein.
   
 0.494
SHJ79063.1
MSHA biogenesis protein MshQ.
   
 0.494
SHJ73212.1
Flagellar basal-body rod protein FlgC.
    
   0.487
Your Current Organism:
Malonomonas rubra
NCBI taxonomy Id: 1122189
Other names: M. rubra DSM 5091, Malonomonas rubra DSM 5091
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.