STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ30839.1Tetratricopeptide repeat-containing protein. (434 aa)    
Predicted Functional Partners:
SHJ79063.1
MSHA biogenesis protein MshQ.
  
     0.763
SHI47584.1
Protein of unknown function.
  
     0.738
SHI74553.1
Aldehyde:ferredoxin oxidoreductase.
  
     0.716
SHI79613.1
Glyceraldehyde-3-phosphate ferredoxin oxidoreductase.
  
     0.628
SHJ35143.1
4-amino-4-deoxy-L-arabinose transferase.
 
     0.611
SHJ27309.1
PPIC-type PPIASE domain-containing protein.
  
     0.571
SHI92244.1
Amino acid/polyamine/organocation transporter, APC superfamily.
  
     0.558
SHJ72978.1
PAS domain S-box-containing protein.
  
     0.558
SHI47498.1
HAMP domain-containing protein.
  
     0.554
SHJ30866.1
HEAT repeat-containing protein.
       0.547
Your Current Organism:
Malonomonas rubra
NCBI taxonomy Id: 1122189
Other names: M. rubra DSM 5091, Malonomonas rubra DSM 5091
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.