STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ35076.1Hypothetical protein. (317 aa)    
Predicted Functional Partners:
SHJ35049.1
Type IV pilus assembly protein PilY1.
 
     0.817
SHJ35096.1
Prepilin-type N-terminal cleavage/methylation domain-containing protein.
       0.774
SHJ18754.1
Delta-60 repeat domain-containing protein.
 
 0.743
SHI60879.1
Ca-activated chloride channel family protein.
 
  
  0.720
SHJ28834.1
Hypothetical protein.
  
  
  0.706
SHJ28958.1
Hypothetical protein.
  
  
  0.705
SHJ30493.1
DNA translocase FtsK.
    
 
 0.698
SHI48140.1
Iron complex outermembrane recepter protein.
    
 
 0.683
SHJ09904.1
Serine protease.
  
 0.678
SHJ35024.1
Hypothetical protein.
       0.678
Your Current Organism:
Malonomonas rubra
NCBI taxonomy Id: 1122189
Other names: M. rubra DSM 5091, Malonomonas rubra DSM 5091
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.