STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ46189.1Cytochrome c oxidase subunit 4. (94 aa)    
Predicted Functional Partners:
SHJ46222.1
Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
 
 0.999
SHJ46155.1
Cytochrome c oxidase subunit 3.
 
 
 0.996
SHJ46124.1
Cytochrome c oxidase subunit 1; Belongs to the heme-copper respiratory oxidase family.
 
  
 0.995
ctaB
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
 
  
  0.993
SHJ46090.1
Protein SCO1/2.
 
   
 0.954
SHJ38828.1
Cytochrome bd-I ubiquinol oxidase subunit 1 apoprotein.
   
 0.935
SHJ31409.1
Cytochrome c.
   
 0.896
SHJ77312.1
3-mercaptopyruvate sulfurtransferase SseA, contains two rhodanese domains.
 
  
 0.850
SHJ37413.1
Hypothetical protein.
   
 
 0.801
SHI90287.1
Cytochrome C oxidase, cbb3-type, subunit III.
   
 0.791
Your Current Organism:
Malonomonas rubra
NCBI taxonomy Id: 1122189
Other names: M. rubra DSM 5091, Malonomonas rubra DSM 5091
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.