STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ69940.1ABC-type transport auxiliary lipoprotein component. (191 aa)    
Predicted Functional Partners:
SHJ69894.1
Paraquat-inducible protein B.
 
   
 0.958
SHJ69860.1
phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein.
 
     0.796
SHJ69844.1
phospholipid/cholesterol/gamma-HCH transport system permease protein.
 
     0.791
SHJ69976.1
Metal-dependent hydrolase, beta-lactamase superfamily II.
       0.588
SHJ90211.1
HNH endonuclease.
  
     0.467
SHJ69805.1
Uncharacterized conserved protein, DUF924 family.
       0.457
SHJ09384.1
CHAD domain-containing protein.
  
     0.448
SHI89832.1
Protein of unknown function.
  
     0.446
Your Current Organism:
Malonomonas rubra
NCBI taxonomy Id: 1122189
Other names: M. rubra DSM 5091, Malonomonas rubra DSM 5091
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.