STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ91680.1Cytochrome c-type biogenesis protein. (248 aa)    
Predicted Functional Partners:
SHJ91651.1
Peroxiredoxin.
  
 0.993
SHI53034.1
Peroxiredoxin.
  
 0.974
SHJ91622.1
Tetratricopeptide repeat-containing protein.
       0.713
SHJ91706.1
Disulfide bond formation protein DsbB; Belongs to the DsbB family.
     
 0.670
SHJ91736.1
Protein-disulfide isomerase.
     
 0.647
SHI96500.1
Cytochrome c-type biogenesis protein CcsB.
 
  
 0.573
SHJ98601.1
Cytochrome c-type biogenesis protein CcsB.
 
  
 0.561
SHJ74356.1
Cytochrome c-type biogenesis protein CcsB.
 
  
 0.557
SHJ98576.1
Cytochrome c biogenesis protein.
 
  
 0.525
msrB-2
methionine-R-sulfoxide reductase.
 
  
 0.517
Your Current Organism:
Malonomonas rubra
NCBI taxonomy Id: 1122189
Other names: M. rubra DSM 5091, Malonomonas rubra DSM 5091
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.