STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AK33_10645Unannotated protein. (251 aa)    
Predicted Functional Partners:
AK33_04215
Unannotated protein.
 
   
 0.791
AK33_04220
Unannotated protein.
 
 
 
 0.779
AK33_08540
Unannotated protein.
    
 
 0.758
AK33_08545
Unannotated protein.
    
 
 0.758
mpl
Unannotated protein; Reutilizes the intact tripeptide L-alanyl-gamma-D-glutamyl- meso-diaminopimelate by linking it to UDP-N-acetylmuramate. Belongs to the MurCDEF family. Mpl subfamily.
       0.590
bamD
Unannotated protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
  
  
 0.540
metJ
Unannotated protein; This regulatory protein, when combined with SAM (S- adenosylmethionine) represses the expression of the methionine regulon and of enzymes involved in SAM synthesis; Belongs to the MetJ family.
       0.520
AK33_04210
Unannotated protein.
 
   
 0.454
panF
Unannotated protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
       0.442
AK33_10655
Unannotated protein.
       0.442
Your Current Organism:
Mannheimia granulomatis
NCBI taxonomy Id: 1122190
Other names: M. granulomatis DSM 19156, Mannheimia granulomatis DSM 19156
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.