STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ35112.1Signal transduction histidine kinase. (906 aa)    
Predicted Functional Partners:
SKA37566.1
GAF sensor hybrid histidine kinase.
 
0.997
SKA34794.1
PAS/PAC sensor signal transduction histidine kinase.
 
0.973
SKA37561.1
Response regulator containing a CheY-like receiver domain and an HD-GYP domain.
 
0.930
SJZ85785.1
NAD-dependent formate dehydrogenase flavoprotein subunit.
   
 
 0.891
SKA26716.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
 
 0.836
SJZ35125.1
Serine phosphatase RsbU, regulator of sigma subunit.
 
    0.814
SKA29465.1
PAS domain S-box-containing protein.
 
 0.814
SKA19790.1
Hypothetical protein.
 
 
0.808
SKA39253.1
Two-component system, OmpR family, sensor kinase.
 
 
0.729
SKA30011.1
Signal transduction histidine kinase.
  
 0.607
Your Current Organism:
Marinactinospora thermotolerans
NCBI taxonomy Id: 1122192
Other names: M. thermotolerans DSM 45154, Marinactinospora thermotolerans DSM 45154
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