STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ58526.1Hypothetical protein. (439 aa)    
Predicted Functional Partners:
SKA36913.1
4-alpha-glucanotransferase.
 
  
  0.797
SKA26539.1
Starch phosphorylase.
  
 
 0.767
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
  
 
 0.766
SKA26524.1
Trehalose synthase.
    
 0.760
SJZ58493.1
Multiple sugar transport system substrate-binding protein.
 
    0.703
SJZ64319.1
Alpha-amylase.
    
 0.696
SJZ58433.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-).
       0.661
SJZ58466.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
       0.661
SKA38089.1
alpha-D-xyloside xylohydrolase; Belongs to the glycosyl hydrolase 31 family.
  
 
  0.661
SJZ55804.1
Alpha-glucosidase.
    
 0.624
Your Current Organism:
Marinactinospora thermotolerans
NCBI taxonomy Id: 1122192
Other names: M. thermotolerans DSM 45154, Marinactinospora thermotolerans DSM 45154
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