STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ66680.1Predicted nucleotidyltransferase. (261 aa)    
Predicted Functional Partners:
SKA39120.1
Polynucleotide kinase-phosphatase.
 
     0.592
SKA39127.1
3' terminal RNA ribose 2'-O-methyltransferase Hen1.
 
     0.569
SJZ80066.1
Endoglucanase Acf2.
  
     0.496
SJZ42430.1
MbtH protein.
  
     0.488
SJZ35139.1
Hypothetical protein.
  
     0.463
SKA02160.1
Intein N-terminal splicing region.
  
     0.452
SJZ36570.1
Hypothetical protein.
  
     0.422
SKA31537.1
Protein of unknown function.
  
     0.412
Your Current Organism:
Marinactinospora thermotolerans
NCBI taxonomy Id: 1122192
Other names: M. thermotolerans DSM 45154, Marinactinospora thermotolerans DSM 45154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.