STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ81436.1Serine phosphatase RsbU, regulator of sigma subunit. (406 aa)    
Predicted Functional Partners:
SKA37577.1
Serine phosphatase RsbU, regulator of sigma subunit.
 
 0.879
SKA37566.1
GAF sensor hybrid histidine kinase.
  
 
 0.874
SKA34791.1
Anti-sigma B factor antagonist; Belongs to the anti-sigma-factor antagonist family.
  
   0.835
SKA34600.1
Anti-sigma B factor antagonist; Belongs to the anti-sigma-factor antagonist family.
  
   0.822
SJZ76202.1
Serine/threonine-protein kinase RsbW.
  
   0.789
SKA33706.1
Serine phosphatase RsbU, regulator of sigma subunit.
  
  
  0.761
SKA34687.1
Serine phosphatase RsbU, regulator of sigma subunit.
  
     0.755
SJZ74831.1
Anti-anti-sigma regulatory factor, SpoIIAA; Belongs to the anti-sigma-factor antagonist family.
  
   0.754
SKA28676.1
PAS domain S-box-containing protein.
  
  
  0.735
SJZ70818.1
PAS domain S-box-containing protein.
  
     0.733
Your Current Organism:
Marinactinospora thermotolerans
NCBI taxonomy Id: 1122192
Other names: M. thermotolerans DSM 45154, Marinactinospora thermotolerans DSM 45154
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