SJZ88892.1 protein (Marinactinospora thermotolerans)

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SJZ88892.1

Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains. (330 aa)

Predicted Functional Partners:

SJZ88903.1

0.742

SJZ65360.1

0.592

rbpA-2

0.554

SKA35727.1

0.551

rpoZ

0.544

rpoB

0.544

rpoC

0.544

rpoA

0.544

SJZ93097.1

0.450

SJZ39278.1

0.433

Your Current Organism:

Marinactinospora thermotolerans

NCBI taxonomy Id: 1122192
Other names: M. thermotolerans DSM 45154, Marinactinospora thermotolerans DSM 45154

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SJZ39278.1	SJZ65360.1	SAMN02745673_00262	SAMN02745673_01077	RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	DNA polymerase-3 subunit epsilon.	0.644
SJZ39278.1	SJZ88892.1	SAMN02745673_00262	SAMN02745673_01722	RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains.	0.433
SJZ39278.1	SKA35727.1	SAMN02745673_00262	SAMN02745673_04526	RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	Transcriptional regulator.	0.882
SJZ39278.1	rbpA-2	SAMN02745673_00262	SAMN02745673_04510	RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	RNA polymerase-binding protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters.	0.984
SJZ39278.1	rpoA	SAMN02745673_00262	SAMN02745673_04036	RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.989
SJZ39278.1	rpoB	SAMN02745673_00262	SAMN02745673_04000	RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.995
SJZ39278.1	rpoC	SAMN02745673_00262	SAMN02745673_04001	RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.993
SJZ39278.1	rpoZ	SAMN02745673_00262	SAMN02745673_01124	RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.976
SJZ65360.1	SJZ39278.1	SAMN02745673_01077	SAMN02745673_00262	DNA polymerase-3 subunit epsilon.	RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	0.644
SJZ65360.1	SJZ88892.1	SAMN02745673_01077	SAMN02745673_01722	DNA polymerase-3 subunit epsilon.	Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains.	0.592
SJZ65360.1	SKA35727.1	SAMN02745673_01077	SAMN02745673_04526	DNA polymerase-3 subunit epsilon.	Transcriptional regulator.	0.592
SJZ65360.1	rpoA	SAMN02745673_01077	SAMN02745673_04036	DNA polymerase-3 subunit epsilon.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.416
SJZ65360.1	rpoB	SAMN02745673_01077	SAMN02745673_04000	DNA polymerase-3 subunit epsilon.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.435
SJZ65360.1	rpoZ	SAMN02745673_01077	SAMN02745673_01124	DNA polymerase-3 subunit epsilon.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.411
SJZ88892.1	SJZ39278.1	SAMN02745673_01722	SAMN02745673_00262	Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains.	RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	0.433
SJZ88892.1	SJZ65360.1	SAMN02745673_01722	SAMN02745673_01077	Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains.	DNA polymerase-3 subunit epsilon.	0.592
SJZ88892.1	SJZ88903.1	SAMN02745673_01722	SAMN02745673_01723	Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains.	Uncharacterized conserved protein PhnB, glyoxalase superfamily.	0.742
SJZ88892.1	SJZ93097.1	SAMN02745673_01722	SAMN02745673_01915	Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains.	Hypothetical protein.	0.450
SJZ88892.1	SKA35727.1	SAMN02745673_01722	SAMN02745673_04526	Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains.	Transcriptional regulator.	0.551
SJZ88892.1	rbpA-2	SAMN02745673_01722	SAMN02745673_04510	Predicted DNA-binding transcriptional regulator YafY, contains an HTH and WYL domains.	RNA polymerase-binding protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters.	0.554