STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ92903.1Two component transcriptional regulator, LuxR family. (228 aa)    
Predicted Functional Partners:
SKA37566.1
GAF sensor hybrid histidine kinase.
  
 0.982
SJZ92909.1
Signal transduction histidine kinase.
 
  0.963
SKA25727.1
Phage shock protein C (PspC) family protein.
  
  0.858
SKA19634.1
Signal transduction histidine kinase.
 
  0.853
SJZ91849.1
Signal transduction histidine kinase.
  
  0.850
SJZ60668.1
Signal transduction histidine kinase.
  
  0.849
SKA36213.1
Signal transduction histidine kinase.
 
  0.845
SJZ39349.1
Signal transduction histidine kinase.
 
  0.840
SJZ88199.1
Signal transduction histidine kinase.
 
  0.832
SKA37591.1
Two-component system, NarL family, sensor histidine kinase DesK.
 
  0.830
Your Current Organism:
Marinactinospora thermotolerans
NCBI taxonomy Id: 1122192
Other names: M. thermotolerans DSM 45154, Marinactinospora thermotolerans DSM 45154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.