Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SJZ42995.1 | vgb | SAMN02745673_00430 | SAMN02745673_01939 | Hypothetical protein. | Virginiamycin B lyase; Inactivates the type B streptogramin antibiotics by linearizing the lactone ring at the ester linkage, generating a free phenylglycine carboxylate and converting the threonyl moiety into 2- amino-butenoic acid. | 0.467 |
| SJZ62208.1 | SKA33397.1 | SAMN02745673_00957 | SAMN02745673_04193 | Dihydrofolate reductase. | Hypothetical protein. | 0.443 |
| SJZ62208.1 | vgb | SAMN02745673_00957 | SAMN02745673_01939 | Dihydrofolate reductase. | Virginiamycin B lyase; Inactivates the type B streptogramin antibiotics by linearizing the lactone ring at the ester linkage, generating a free phenylglycine carboxylate and converting the threonyl moiety into 2- amino-butenoic acid. | 0.440 |
| SJZ87465.1 | vgb | SAMN02745673_01665 | SAMN02745673_01939 | 23S rRNA (adenine-N6)-dimethyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. | Virginiamycin B lyase; Inactivates the type B streptogramin antibiotics by linearizing the lactone ring at the ester linkage, generating a free phenylglycine carboxylate and converting the threonyl moiety into 2- amino-butenoic acid. | 0.492 |
| SJZ89904.1 | vgb | SAMN02745673_01772 | SAMN02745673_01939 | Streptomycin 3-kinase; Belongs to the aminoglycoside phosphotransferase family. | Virginiamycin B lyase; Inactivates the type B streptogramin antibiotics by linearizing the lactone ring at the ester linkage, generating a free phenylglycine carboxylate and converting the threonyl moiety into 2- amino-butenoic acid. | 0.571 |
| SJZ93600.1 | vgb | SAMN02745673_01940 | SAMN02745673_01939 | Pimeloyl-ACP methyl ester carboxylesterase. | Virginiamycin B lyase; Inactivates the type B streptogramin antibiotics by linearizing the lactone ring at the ester linkage, generating a free phenylglycine carboxylate and converting the threonyl moiety into 2- amino-butenoic acid. | 0.563 |
| SJZ93806.1 | vgb | SAMN02745673_01950 | SAMN02745673_01939 | Kanamycin kinase; Belongs to the aminoglycoside phosphotransferase family. | Virginiamycin B lyase; Inactivates the type B streptogramin antibiotics by linearizing the lactone ring at the ester linkage, generating a free phenylglycine carboxylate and converting the threonyl moiety into 2- amino-butenoic acid. | 0.494 |
| SJZ94191.1 | vgb | SAMN02745673_01962 | SAMN02745673_01939 | DNA-binding transcriptional regulator, ArsR family. | Virginiamycin B lyase; Inactivates the type B streptogramin antibiotics by linearizing the lactone ring at the ester linkage, generating a free phenylglycine carboxylate and converting the threonyl moiety into 2- amino-butenoic acid. | 0.623 |
| SKA23238.1 | vgb | SAMN02745673_03194 | SAMN02745673_01939 | Methylase involved in ubiquinone/menaquinone biosynthesis. | Virginiamycin B lyase; Inactivates the type B streptogramin antibiotics by linearizing the lactone ring at the ester linkage, generating a free phenylglycine carboxylate and converting the threonyl moiety into 2- amino-butenoic acid. | 0.456 |
| SKA33397.1 | SJZ62208.1 | SAMN02745673_04193 | SAMN02745673_00957 | Hypothetical protein. | Dihydrofolate reductase. | 0.443 |
| SKA33397.1 | vgb | SAMN02745673_04193 | SAMN02745673_01939 | Hypothetical protein. | Virginiamycin B lyase; Inactivates the type B streptogramin antibiotics by linearizing the lactone ring at the ester linkage, generating a free phenylglycine carboxylate and converting the threonyl moiety into 2- amino-butenoic acid. | 0.467 |
| rpoA | vgb | SAMN02745673_04036 | SAMN02745673_01939 | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Virginiamycin B lyase; Inactivates the type B streptogramin antibiotics by linearizing the lactone ring at the ester linkage, generating a free phenylglycine carboxylate and converting the threonyl moiety into 2- amino-butenoic acid. | 0.561 |
| vgb | SJZ42995.1 | SAMN02745673_01939 | SAMN02745673_00430 | Virginiamycin B lyase; Inactivates the type B streptogramin antibiotics by linearizing the lactone ring at the ester linkage, generating a free phenylglycine carboxylate and converting the threonyl moiety into 2- amino-butenoic acid. | Hypothetical protein. | 0.467 |
| vgb | SJZ62208.1 | SAMN02745673_01939 | SAMN02745673_00957 | Virginiamycin B lyase; Inactivates the type B streptogramin antibiotics by linearizing the lactone ring at the ester linkage, generating a free phenylglycine carboxylate and converting the threonyl moiety into 2- amino-butenoic acid. | Dihydrofolate reductase. | 0.440 |
| vgb | SJZ87465.1 | SAMN02745673_01939 | SAMN02745673_01665 | Virginiamycin B lyase; Inactivates the type B streptogramin antibiotics by linearizing the lactone ring at the ester linkage, generating a free phenylglycine carboxylate and converting the threonyl moiety into 2- amino-butenoic acid. | 23S rRNA (adenine-N6)-dimethyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. | 0.492 |
| vgb | SJZ89904.1 | SAMN02745673_01939 | SAMN02745673_01772 | Virginiamycin B lyase; Inactivates the type B streptogramin antibiotics by linearizing the lactone ring at the ester linkage, generating a free phenylglycine carboxylate and converting the threonyl moiety into 2- amino-butenoic acid. | Streptomycin 3-kinase; Belongs to the aminoglycoside phosphotransferase family. | 0.571 |
| vgb | SJZ93600.1 | SAMN02745673_01939 | SAMN02745673_01940 | Virginiamycin B lyase; Inactivates the type B streptogramin antibiotics by linearizing the lactone ring at the ester linkage, generating a free phenylglycine carboxylate and converting the threonyl moiety into 2- amino-butenoic acid. | Pimeloyl-ACP methyl ester carboxylesterase. | 0.563 |
| vgb | SJZ93806.1 | SAMN02745673_01939 | SAMN02745673_01950 | Virginiamycin B lyase; Inactivates the type B streptogramin antibiotics by linearizing the lactone ring at the ester linkage, generating a free phenylglycine carboxylate and converting the threonyl moiety into 2- amino-butenoic acid. | Kanamycin kinase; Belongs to the aminoglycoside phosphotransferase family. | 0.494 |
| vgb | SJZ94191.1 | SAMN02745673_01939 | SAMN02745673_01962 | Virginiamycin B lyase; Inactivates the type B streptogramin antibiotics by linearizing the lactone ring at the ester linkage, generating a free phenylglycine carboxylate and converting the threonyl moiety into 2- amino-butenoic acid. | DNA-binding transcriptional regulator, ArsR family. | 0.623 |
| vgb | SKA23238.1 | SAMN02745673_01939 | SAMN02745673_03194 | Virginiamycin B lyase; Inactivates the type B streptogramin antibiotics by linearizing the lactone ring at the ester linkage, generating a free phenylglycine carboxylate and converting the threonyl moiety into 2- amino-butenoic acid. | Methylase involved in ubiquinone/menaquinone biosynthesis. | 0.456 |
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