STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ95270.1ADP-ribose pyrophosphatase YjhB, NUDIX family. (163 aa)    
Predicted Functional Partners:
SKA31356.1
PRC-barrel domain-containing protein.
  
     0.597
SJZ79762.1
Conserved domain-containing protein.
  
     0.557
nadE
NH(3)-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
    
 0.520
SKA36024.1
Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
    
  0.512
SJZ45942.1
Tetratricopeptide (TPR) repeat.
  
     0.453
SJZ95284.1
Threonine/homoserine efflux transporter RhtA.
       0.452
SKA14249.1
Hypothetical protein.
  
     0.428
SKA14322.1
Transcriptional regulator, contains XRE-family HTH domain.
  
     0.413
Your Current Organism:
Marinactinospora thermotolerans
NCBI taxonomy Id: 1122192
Other names: M. thermotolerans DSM 45154, Marinactinospora thermotolerans DSM 45154
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.