STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA12031.1ABC-2 type transport system ATP-binding protein. (251 aa)    
Predicted Functional Partners:
SJZ44655.1
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family.
 
   
 
0.915
SKA18565.1
Biotin transport system ATP-binding protein.
 
  
 
0.781
SKA12013.1
ABC-2 type transport system permease protein.
 
    0.780
SKA12049.1
Pimeloyl-ACP methyl ester carboxylesterase.
       0.773
SKA12063.1
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.
       0.773
SJZ70611.1
ABC-type antimicrobial peptide transport system, ATPase component.
  
     0.688
SJZ43160.1
ABC-2 type transport system ATP-binding protein.
 
    
0.676
SKA35673.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
 
  
 
0.661
atpD
ATP synthase F1 subcomplex beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
    
   0.584
atpA
ATP synthase F1 subcomplex alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.
    
   0.582
Your Current Organism:
Marinactinospora thermotolerans
NCBI taxonomy Id: 1122192
Other names: M. thermotolerans DSM 45154, Marinactinospora thermotolerans DSM 45154
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