STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA22371.1Formiminoglutamate deiminase. (469 aa)    
Predicted Functional Partners:
SKA22362.1
N-carbamoyl-L-amino-acid hydrolase.
    0.970
hutI
Imidazolonepropionase.
 
  
 0.963
hutU
Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate.
 
  
 0.839
SKA22339.1
Histidine ammonia-lyase.
 
  
 0.820
SJZ55548.1
Imidazolonepropionase; Belongs to the metallo-dependent hydrolases superfamily. HutI family.
 
  
 0.806
SJZ86715.1
Xanthine dehydrogenase YagR molybdenum-binding subunit.
  
 
 0.686
SJZ81005.1
Guanine deaminase.
  
     0.491
SKA22413.1
Acetyltransferases, including N-acetylases of ribosomal proteins.
       0.469
upp
Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.
  
 
 0.465
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
   
 
 0.443
Your Current Organism:
Marinactinospora thermotolerans
NCBI taxonomy Id: 1122192
Other names: M. thermotolerans DSM 45154, Marinactinospora thermotolerans DSM 45154
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