STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA23908.1Pimeloyl-ACP methyl ester carboxylesterase. (293 aa)    
Predicted Functional Partners:
SJZ42308.1
Amino acid adenylation domain-containing protein/thioester reductase domain-containing protein.
   
 0.922
SKA23892.1
Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding.
 
     0.827
SJZ43867.1
Amino acid adenylation domain-containing protein/natural product biosynthesis luciferase-like monooxygenase domain-containing protein.
  
 0.806
SJZ42284.1
Uncharacterized protein containing a NRPS condensation (elongation) domain.
   
 0.751
SJZ43906.1
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
   
 0.748
SKA30713.1
Phosphopantetheine attachment site.
  
 0.697
SKA39974.1
Acyl transferase domain-containing protein.
  
 0.675
SKA23581.1
Amino acid adenylation domain-containing protein/thioester reductase domain-containing protein.
   
 0.653
SJZ59147.1
Acyl transferase domain-containing protein.
  
 0.636
SKA09082.1
Acyl transferase domain-containing protein.
  
 0.636
Your Current Organism:
Marinactinospora thermotolerans
NCBI taxonomy Id: 1122192
Other names: M. thermotolerans DSM 45154, Marinactinospora thermotolerans DSM 45154
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