rpmF-2 protein (Marinactinospora thermotolerans)

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

rpmF-2

LSU ribosomal protein L32P; Belongs to the bacterial ribosomal protein bL32 family. (59 aa)

Predicted Functional Partners:

rpmJ

0.991

rpmB-2

0.990

rpsO

0.987

rpsP

0.987

rpsZ

0.987

rpsF

0.986

rpmB

0.985

rpmG

0.985

rpmG-2

0.985

rpmE

0.984

Your Current Organism:

Marinactinospora thermotolerans

NCBI taxonomy Id: 1122192
Other names: M. thermotolerans DSM 45154, Marinactinospora thermotolerans DSM 45154

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
rpmB	rpmE	SAMN02745673_01427	SAMN02745673_02114	LSU ribosomal protein L28P; Belongs to the bacterial ribosomal protein bL28 family.	LSU ribosomal protein L31P; Binds the 23S rRNA.	0.981
rpmB	rpmF-2	SAMN02745673_01427	SAMN02745673_03510	LSU ribosomal protein L28P; Belongs to the bacterial ribosomal protein bL28 family.	LSU ribosomal protein L32P; Belongs to the bacterial ribosomal protein bL32 family.	0.985
rpmB	rpmG	SAMN02745673_01427	SAMN02745673_01633	LSU ribosomal protein L28P; Belongs to the bacterial ribosomal protein bL28 family.	LSU ribosomal protein L33P; Belongs to the bacterial ribosomal protein bL33 family.	0.997
rpmB	rpmG-2	SAMN02745673_01427	SAMN02745673_03984	LSU ribosomal protein L28P; Belongs to the bacterial ribosomal protein bL28 family.	LSU ribosomal protein L33P; Belongs to the bacterial ribosomal protein bL33 family.	0.985
rpmB	rpmJ	SAMN02745673_01427	SAMN02745673_04033	LSU ribosomal protein L28P; Belongs to the bacterial ribosomal protein bL28 family.	LSU ribosomal protein L36P; Belongs to the bacterial ribosomal protein bL36 family.	0.989
rpmB	rpsF	SAMN02745673_01427	SAMN02745673_02707	LSU ribosomal protein L28P; Belongs to the bacterial ribosomal protein bL28 family.	SSU ribosomal protein S6P; Binds together with S18 to 16S ribosomal RNA.	0.986
rpmB	rpsO	SAMN02745673_01427	SAMN02745673_00674	LSU ribosomal protein L28P; Belongs to the bacterial ribosomal protein bL28 family.	SSU ribosomal protein S15P; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.984
rpmB	rpsP	SAMN02745673_01427	SAMN02745673_03523	LSU ribosomal protein L28P; Belongs to the bacterial ribosomal protein bL28 family.	SSU ribosomal protein S16P; Belongs to the bacterial ribosomal protein bS16 family.	0.984
rpmB	rpsZ	SAMN02745673_01427	SAMN02745673_04021	LSU ribosomal protein L28P; Belongs to the bacterial ribosomal protein bL28 family.	SSU ribosomal protein S14P; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.	0.987
rpmB-2	rpmE	SAMN02745673_03505	SAMN02745673_02114	LSU ribosomal protein L28P; Belongs to the bacterial ribosomal protein bL28 family.	LSU ribosomal protein L31P; Binds the 23S rRNA.	0.999
rpmB-2	rpmF-2	SAMN02745673_03505	SAMN02745673_03510	LSU ribosomal protein L28P; Belongs to the bacterial ribosomal protein bL28 family.	LSU ribosomal protein L32P; Belongs to the bacterial ribosomal protein bL32 family.	0.990
rpmB-2	rpmG	SAMN02745673_03505	SAMN02745673_01633	LSU ribosomal protein L28P; Belongs to the bacterial ribosomal protein bL28 family.	LSU ribosomal protein L33P; Belongs to the bacterial ribosomal protein bL33 family.	0.987
rpmB-2	rpmG-2	SAMN02745673_03505	SAMN02745673_03984	LSU ribosomal protein L28P; Belongs to the bacterial ribosomal protein bL28 family.	LSU ribosomal protein L33P; Belongs to the bacterial ribosomal protein bL33 family.	0.999
rpmB-2	rpmJ	SAMN02745673_03505	SAMN02745673_04033	LSU ribosomal protein L28P; Belongs to the bacterial ribosomal protein bL28 family.	LSU ribosomal protein L36P; Belongs to the bacterial ribosomal protein bL36 family.	0.999
rpmB-2	rpsF	SAMN02745673_03505	SAMN02745673_02707	LSU ribosomal protein L28P; Belongs to the bacterial ribosomal protein bL28 family.	SSU ribosomal protein S6P; Binds together with S18 to 16S ribosomal RNA.	0.999
rpmB-2	rpsO	SAMN02745673_03505	SAMN02745673_00674	LSU ribosomal protein L28P; Belongs to the bacterial ribosomal protein bL28 family.	SSU ribosomal protein S15P; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.999
rpmB-2	rpsP	SAMN02745673_03505	SAMN02745673_03523	LSU ribosomal protein L28P; Belongs to the bacterial ribosomal protein bL28 family.	SSU ribosomal protein S16P; Belongs to the bacterial ribosomal protein bS16 family.	0.999
rpmB-2	rpsZ	SAMN02745673_03505	SAMN02745673_04021	LSU ribosomal protein L28P; Belongs to the bacterial ribosomal protein bL28 family.	SSU ribosomal protein S14P; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.	0.999
rpmE	rpmB	SAMN02745673_02114	SAMN02745673_01427	LSU ribosomal protein L31P; Binds the 23S rRNA.	LSU ribosomal protein L28P; Belongs to the bacterial ribosomal protein bL28 family.	0.981
rpmE	rpmB-2	SAMN02745673_02114	SAMN02745673_03505	LSU ribosomal protein L31P; Binds the 23S rRNA.	LSU ribosomal protein L28P; Belongs to the bacterial ribosomal protein bL28 family.	0.999