STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA35247.1Glycosyltransferase. (375 aa)    
Predicted Functional Partners:
SJZ95258.1
Hypothetical protein.
   
 0.951
SKA25790.1
ATP-dependent DNA helicase, Rep family.
   
 0.943
SKA37566.1
GAF sensor hybrid histidine kinase.
   
 0.938
SKA36073.1
Molecular chaperone HtpG.
   
 0.908
SKA35222.1
Nucleoside-diphosphate-sugar epimerase.
 
 
  0.855
dnaK
Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.838
SKA19279.1
Hypothetical protein.
    
 0.837
SJZ42308.1
Amino acid adenylation domain-containing protein/thioester reductase domain-containing protein.
  
 0.817
SKA29348.1
ATP-dependent DNA helicase RecQ.
   
 
 0.815
SJZ39525.1
Mannose-1-phosphate guanylyltransferase / phosphomannomutase.
 
 0.795
Your Current Organism:
Marinactinospora thermotolerans
NCBI taxonomy Id: 1122192
Other names: M. thermotolerans DSM 45154, Marinactinospora thermotolerans DSM 45154
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