STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA35300.1L-lactate dehydrogenase complex protein LldF. (476 aa)    
Predicted Functional Partners:
SKA35298.1
L-lactate dehydrogenase complex protein LldE.
 0.997
SKA35304.1
L-lactate dehydrogenase complex protein LldG.
 
 0.996
SJZ39431.1
L-lactate dehydrogenase complex protein LldE.
 0.990
SJZ39413.1
L-lactate dehydrogenase complex protein LldG.
 
 0.962
SKA31503.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
  
 
 0.864
SKA35330.1
FAD/FMN-containing dehydrogenase.
  
 0.798
SJZ44928.1
Glutamate synthase (NADH) large subunit.
    
  0.753
SJZ55403.1
Glycolate oxidase iron-sulfur subunit.
 
 0.752
SKA00529.1
Lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.
 
  
 0.743
gcvP
Glycine dehydrogenase (decarboxylating) alpha subunit; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
    
 0.737
Your Current Organism:
Marinactinospora thermotolerans
NCBI taxonomy Id: 1122192
Other names: M. thermotolerans DSM 45154, Marinactinospora thermotolerans DSM 45154
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