STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA38606.1Histidine kinase. (412 aa)    
Predicted Functional Partners:
SKA38603.1
Two component transcriptional regulator, LuxR family.
  0.971
SJZ87945.1
Two component transcriptional regulator, LuxR family.
 
  0.876
SKA13395.1
Two component transcriptional regulator, LuxR family.
 
  0.876
SKA37386.1
Two component transcriptional regulator, LuxR family.
 
  0.875
SKA37566.1
GAF sensor hybrid histidine kinase.
  
 0.872
SJZ89428.1
Two component transcriptional regulator, LuxR family.
  
  0.827
SJZ92903.1
Two component transcriptional regulator, LuxR family.
  
  0.822
SKA35943.1
Two component transcriptional regulator, LuxR family.
  
  0.821
SJZ88216.1
Two component transcriptional regulator, LuxR family.
  
  0.820
SKA19624.1
Two component transcriptional regulator, LuxR family.
  
  0.815
Your Current Organism:
Marinactinospora thermotolerans
NCBI taxonomy Id: 1122192
Other names: M. thermotolerans DSM 45154, Marinactinospora thermotolerans DSM 45154
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