STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000423345_01015Unannotated protein. (249 aa)    
Predicted Functional Partners:
GCA_000423345_01014
Unannotated protein.
  
 
 0.966
GCA_000423345_00807
Unannotated protein.
  
  
 0.965
GCA_000423345_02697
Unannotated protein.
   
 0.926
GCA_000423345_00808
Unannotated protein.
  
  
 0.919
GCA_000423345_03289
Unannotated protein.
   
 
 0.919
GCA_000423345_02040
Unannotated protein.
  
 0.905
GCA_000423345_01013
Unannotated protein.
 
  
 0.854
GCA_000423345_02698
Unannotated protein.
  
 
 0.816
GCA_000423345_00370
Unannotated protein.
   
 0.776
GCA_000423345_02227
Unannotated protein.
   
  0.752
Your Current Organism:
Marinimicrobium agarilyticum
NCBI taxonomy Id: 1122194
Other names: M. agarilyticum DSM 16975, Marinimicrobium agarilyticum DSM 16975
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.