STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000421165_02007Unannotated protein. (321 aa)    
Predicted Functional Partners:
GCA_000421165_02006
Unannotated protein.
 
   
 0.845
GCA_000421165_00328
Unannotated protein.
    
 0.762
GCA_000421165_03380
Unannotated protein.
 
     0.655
GCA_000421165_03379
Unannotated protein.
 
   
 0.585
GCA_000421165_02914
Unannotated protein.
    
  0.513
GCA_000421165_03127
Unannotated protein.
    
  0.513
GCA_000421165_00883
Unannotated protein.
  
     0.452
GCA_000421165_00322
Unannotated protein.
  
  
 0.448
GCA_000421165_02692
Unannotated protein.
  
  
 0.448
GCA_000421165_01237
Unannotated protein.
  
  
 0.431
Your Current Organism:
Marinobacter daepoensis
NCBI taxonomy Id: 1122197
Other names: M. daepoensis DSM 16072, Marinobacter daepoensis DSM 16072
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.