STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000620085_03992Unannotated protein. (156 aa)    
Predicted Functional Partners:
GCA_000620085_03993
Unannotated protein.
 
  
 
0.929
GCA_000620085_02161
Unannotated protein.
 
 
 0.916
GCA_000620085_03429
Unannotated protein.
  
 
 0.809
GCA_000620085_00889
Unannotated protein.
     
 0.789
GCA_000620085_03160
Unannotated protein.
 
  
 
0.735
GCA_000620085_01209
Unannotated protein.
   
  
 0.545
GCA_000620085_00486
Unannotated protein.
   
    0.463
GCA_000620085_01214
Unannotated protein.
  
  
 0.463
GCA_000620085_01718
Unannotated protein.
   
  
 0.441
GCA_000620085_02442
Unannotated protein.
   
  
 0.441
Your Current Organism:
Marinobacterium jannaschii
NCBI taxonomy Id: 1122200
Other names: M. jannaschii DSM 6295, Marinobacterium jannaschii DSM 6295
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.