STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000620085_04156Unannotated protein. (167 aa)    
Predicted Functional Partners:
GCA_000620085_04155
Unannotated protein.
 
     0.890
GCA_000620085_00502
Unannotated protein.
  
   
 0.714
GCA_000620085_03281
Unannotated protein.
  
 
 0.664
GCA_000620085_01935
Unannotated protein.
    
 0.657
GCA_000620085_03630
Unannotated protein.
    
 0.657
GCA_000620085_03693
Unannotated protein.
  
     0.634
GCA_000620085_03806
Unannotated protein.
    
   0.583
GCA_000620085_01139
Unannotated protein.
  
  
 0.573
GCA_000620085_00817
Unannotated protein.
    
   0.571
GCA_000620085_00824
Unannotated protein.
    
   0.571
Your Current Organism:
Marinobacterium jannaschii
NCBI taxonomy Id: 1122200
Other names: M. jannaschii DSM 6295, Marinobacterium jannaschii DSM 6295
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.