STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000428985_00547Unannotated protein. (98 aa)    
Predicted Functional Partners:
GCA_000428985_00546
Unannotated protein.
 
     0.835
GCA_000428985_02679
Unannotated protein.
 
  
 0.786
GCA_000428985_03170
Unannotated protein.
 
     0.777
GCA_000428985_00730
Unannotated protein.
  
     0.773
GCA_000428985_00169
Unannotated protein.
 
  
 0.769
GCA_000428985_03187
Unannotated protein.
  
     0.767
GCA_000428985_03155
Unannotated protein.
  
    0.742
GCA_000428985_01123
Unannotated protein.
  
 
 0.735
GCA_000428985_02028
Unannotated protein.
  
     0.729
GCA_000428985_03169
Unannotated protein.
  
     0.704
Your Current Organism:
Marinobacterium litorale
NCBI taxonomy Id: 1122201
Other names: M. litorale DSM 23545, Marinobacterium litorale DSM 23545
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.