STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000428985_01182Unannotated protein. (135 aa)    
Predicted Functional Partners:
GCA_000428985_01181
Unannotated protein.
       0.581
GCA_000428985_01887
Unannotated protein.
    
 0.522
GCA_000428985_02870
Unannotated protein.
 
    0.522
GCA_000428985_01888
Unannotated protein.
    
 0.486
GCA_000428985_03867
Unannotated protein.
     
 0.446
GCA_000428985_03671
Unannotated protein.
     
 0.429
GCA_000428985_02447
Unannotated protein.
  
     0.407
Your Current Organism:
Marinobacterium litorale
NCBI taxonomy Id: 1122201
Other names: M. litorale DSM 23545, Marinobacterium litorale DSM 23545
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.