STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000428985_01543Unannotated protein. (326 aa)    
Predicted Functional Partners:
GCA_000428985_01540
Unannotated protein.
 
 
 0.999
GCA_000428985_01541
Unannotated protein.
 
 
 0.999
GCA_000428985_01542
Unannotated protein.
 
  
 0.823
GCA_000428985_01307
Unannotated protein.
     
 0.757
GCA_000428985_00709
Unannotated protein.
     
 0.711
GCA_000428985_03938
Unannotated protein.
  
  
 0.702
GCA_000428985_01274
Unannotated protein.
  
  
  0.697
GCA_000428985_00177
Unannotated protein.
     
 0.694
GCA_000428985_00411
Unannotated protein.
  
  
  0.691
GCA_000428985_00371
Unannotated protein.
  
  
  0.689
Your Current Organism:
Marinobacterium litorale
NCBI taxonomy Id: 1122201
Other names: M. litorale DSM 23545, Marinobacterium litorale DSM 23545
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.