STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000428985_03480Unannotated protein. (958 aa)    
Predicted Functional Partners:
GCA_000428985_03481
Unannotated protein.
 
 0.999
GCA_000428985_03482
Unannotated protein.
 
 0.999
GCA_000428985_03478
Unannotated protein.
  
 0.997
GCA_000428985_03479
Unannotated protein.
 
 0.996
GCA_000428985_03186
Unannotated protein.
 
 0.982
GCA_000428985_03152
Unannotated protein.
  
 0.980
GCA_000428985_00514
Unannotated protein.
 0.978
GCA_000428985_03903
Unannotated protein.
 
0.974
GCA_000428985_02329
Unannotated protein.
  
 
 0.972
GCA_000428985_00670
Unannotated protein.
  
 0.965
Your Current Organism:
Marinobacterium litorale
NCBI taxonomy Id: 1122201
Other names: M. litorale DSM 23545, Marinobacterium litorale DSM 23545
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.