STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW00757.1Xylan 1,4-beta-xylosidase; Belongs to the glycosyl hydrolase 43 family. (540 aa)    
Predicted Functional Partners:
SDW75603.1
Endo-1,4-beta-xylanase.
 
 0.929
SDW20882.1
alpha-N-arabinofuranosidase.
 
 
 0.865
xylA
D-xylose isomerase; Belongs to the xylose isomerase family.
 
  
 0.859
SDW08909.1
Xylan 1,4-beta-xylosidase.
 
  
 0.770
araA
L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose.
 
 
 0.767
SDW42663.1
Beta-galactosidase/evolved beta-galactosidase subunit alpha.
 
  
 0.740
SDW65259.1
Enterochelin esterase.
    
 0.693
SDW84622.1
Polysaccharide deacetylase family sporulation protein PdaB.
     
 0.673
SDW00810.1
Uncharacterized membrane protein YesL.
 
     0.669
uxaC
D-glucuronate isomerase.
    
 0.658
Your Current Organism:
Marinococcus luteus
NCBI taxonomy Id: 1122204
Other names: CCTCC AA 208014, DSM 23126, KCTC 13214, M. luteus, Marinococcus luteus Wang et al. 2009, YIM 91094
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