STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW13793.1Hypothetical protein. (106 aa)    
Predicted Functional Partners:
nadE
NH(3)-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source; Belongs to the NAD synthetase family.
 
    0.954
SDW13768.1
acyl-CoA thioester hydrolase.
  
  
 0.805
SDW13743.1
AAA+-type ATPase, SpoVK/Ycf46/Vps4 family.
       0.791
SDW03985.1
Uncharacterized protein YfkK, UPF0435 family; Belongs to the UPF0435 family.
  
     0.744
SDW01608.1
Putative cell-wall binding lipoprotein.
  
     0.673
SDW79689.1
Hypothetical protein.
  
     0.665
SDW15981.1
HEAT repeat-containing protein.
  
     0.663
SDW68234.1
Tetratricopeptide repeat-containing protein.
  
     0.592
SDW05668.1
Cell fate regulator YmcA, YheA/YmcA/DUF963 family (controls sporulation, competence, biofilm development); Belongs to the UPF0342 family.
  
     0.578
addB
DNA helicase/exodeoxyribonuclease V, subunit B; ATP-dependent DNA helicase; Belongs to the helicase family. AddB/RexB type 1 subfamily.
  
     0.510
Your Current Organism:
Marinococcus luteus
NCBI taxonomy Id: 1122204
Other names: CCTCC AA 208014, DSM 23126, KCTC 13214, M. luteus, Marinococcus luteus Wang et al. 2009, YIM 91094
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.