STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW27438.1Uncharacterized integral membrane protein. (106 aa)    
Predicted Functional Partners:
SDW51723.1
Hypothetical protein.
  
     0.602
secF
Preprotein translocase subunit SecF/SecD/SecF fusion protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.
       0.585
secD
Preprotein translocase subunit SecD/SecD/SecF fusion protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.
       0.585
SDW66880.1
Uncharacterized protein YoxC, contains an MCP-like domain.
  
    0.580
SDW85517.1
Protein of unknown function.
  
  
  0.569
SDW27417.1
Exonuclease RecJ.
       0.550
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
       0.510
SDX01362.1
Uncharacterized protein YoxC, contains an MCP-like domain.
  
    0.484
SDX01664.1
Predicted small secreted protein.
  
     0.478
SDW14105.1
Uncharacterized SPBc2 prophage-derived protein YoqJ; Belongs to the UPF0398 family.
  
     0.468
Your Current Organism:
Marinococcus luteus
NCBI taxonomy Id: 1122204
Other names: CCTCC AA 208014, DSM 23126, KCTC 13214, M. luteus, Marinococcus luteus Wang et al. 2009, YIM 91094
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