STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW42712.1Capsular polysaccharide biosynthesis protein. (251 aa)    
Predicted Functional Partners:
SDW43435.1
Capsular exopolysaccharide family.
 
 0.993
SDW43291.1
Protein-tyrosine phosphatase.
 
 
 0.865
SDW43759.1
Protein-tyrosine phosphatase.
 
 
 0.865
SDW43876.1
Tyrosine-protein phosphatase YwqE.
 
 
 0.865
SDW43359.1
Protein-tyrosine phosphatase.
 
 
 0.864
SDW42935.1
O-antigen biosynthesis protein WbqP.
 
  
 0.656
SDW42969.1
NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC.
 
    0.638
SDW43203.1
Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid).
 
  
 0.638
SDW98202.1
ATP-binding protein involved in chromosome partitioning; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
  
 
 0.611
SDW42737.1
Membrane protein involved in the export of O-antigen and teichoic acid.
  
  
 0.486
Your Current Organism:
Marinococcus luteus
NCBI taxonomy Id: 1122204
Other names: CCTCC AA 208014, DSM 23126, KCTC 13214, M. luteus, Marinococcus luteus Wang et al. 2009, YIM 91094
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