STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW43453.1Hypothetical protein. (264 aa)    
Predicted Functional Partners:
SDW08394.1
3-hydroxyacyl-CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family.
   
 
 0.795
SDW18791.1
Right handed beta helix region.
    
  0.553
SDW37280.1
Hypothetical protein.
    
  0.553
SDW84424.1
Parallel beta-helix repeat (two copies).
    
  0.553
SDW43435.1
Capsular exopolysaccharide family.
     
 0.550
SDW54649.1
6-phospho-beta-glucosidase; Belongs to the glycosyl hydrolase 1 family.
     
 0.526
SDW75603.1
Endo-1,4-beta-xylanase.
     
 0.495
SDW43483.1
Sulfotransferase domain-containing protein.
       0.492
SDW00757.1
Xylan 1,4-beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
    
 0.454
SDW00175.1
Hypothetical protein.
    
 
 0.421
Your Current Organism:
Marinococcus luteus
NCBI taxonomy Id: 1122204
Other names: CCTCC AA 208014, DSM 23126, KCTC 13214, M. luteus, Marinococcus luteus Wang et al. 2009, YIM 91094
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.