STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW44793.1DNA-binding transcriptional regulator LsrR, DeoR family. (313 aa)    
Predicted Functional Partners:
SDW59483.1
Dihydroxyacetone kinase DhaK subunit.
  
  0.954
SDW44772.1
Glucitol operon activator protein (GutM).
 
     0.830
SDW44751.1
PTS system, glucitol/sorbitol-specific IIC component.
 
     0.824
SDW44673.1
Predicted homoserine dehydrogenase, contains C-terminal SAF domain.
 
     0.821
SDW44724.1
PTS system, glucitol/sorbitol-specific IIC component.
 
     0.797
SDW44692.1
PTS system, glucitol/sorbitol-specific IIA component.
 
     0.763
SDW44844.1
Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase).
 
     0.636
SDW44821.1
Dihydrolipoamide dehydrogenase.
 
     0.604
SDW44887.1
Pyruvate dehydrogenase E1 component alpha subunit.
 
     0.560
SDW59458.1
Dihydroxyacetone kinase, C-terminal domain.
 
  
  0.549
Your Current Organism:
Marinococcus luteus
NCBI taxonomy Id: 1122204
Other names: CCTCC AA 208014, DSM 23126, KCTC 13214, M. luteus, Marinococcus luteus Wang et al. 2009, YIM 91094
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.